BioSTORM
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Table of Contents

Software

In the following we present the different components of the BioSTORM software. We present screenshots of the ontological models, the software tools that we have developed or adapted as part of our tool set, and of a few representative results produced by our system.

Click on each picture for an expanded explanation of the underlying component.

Models

  1. General task structure of temporal aberrancy detection algorithms:

    General task structure of temporal aberrancy detection algorithms
  2. Relationship among tasks, methods, iterations and algorithms:

    Relationship among tasks, methods, iterations and algorithms
  3. Representation of EARS C-family algorithms:

    Representation of EARS C-family algorithms
  4. Evaluation configuration for C-family algorithms running on CDC data sets:

    Evaluation configuration for C-family algorithms running on CDC data sets

Tools

  1. BioSTORM

    The BioSTORM software
  2. ModelValidator Protege plug-in

    BioSTORM Model Validator plug-in
  3. OntologyBeanGenerator Protege plug-in

    Ontology Bean Generator Tab
  4. DataMaster Protege plug-in

    DataMaster plug-in
  5. SWRLTab Protege plug-in

    SWRL Rules Tab

Results

  1. Differences between CDC and BioSTORM results for selected datasets:

    Differences between CDC and BioSTORM results for selected datasets
  2. ROC plots for data sets 3 and 15:

    ROC plots for data sets 3 and 15
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